8. Credits

8.1. Citations

If Algotom is useful for your project, citing the following article [C1] is very much appreciated.


Nghia T. Vo, Robert C. Atwood, Michael Drakopoulos, and Thomas Connolley. Data processing methods and data acquisition for samples larger than the field of view in parallel-beam tomography. Opt. Express, 29(12):17849–17874, Jun 2021. URL: http://www.opticsexpress.org/abstract.cfm?URI=oe-29-12-17849, doi:10.1364/OE.418448.

Algorithms, methods, or techniques implemented in a scientific software package are crucial for its success. This is the same for Algotom. Acknowledging algorithms you use through Algotom is also very much appreciated.

8.2. References


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Sebastien Berujon and Eric Ziegler. X-ray multimodal tomography using speckle-vector tracking. Phys. Rev. Applied, 5:044014, 2016. doi:10.1103/PhysRevApplied.5.044014.


Pan Bing, Xie Hui-min, Xu Bo-qin, and Dai Fu-long. Performance of sub-pixel registration algorithms in digital image correlation. Measurement Science and Technology, 17(6):1615–1621, may 2006. URL: https://doi.org/10.1088/0957-0233/17/6/045, doi:10.1088/0957-0233/17/6/045.


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G. H. Fisher and B. T. Welsch. Flct: a fast, efficient method for performing local correlation tracking. 2007. URL: https://arxiv.org/abs/0712.4289, doi:10.48550/ARXIV.0712.4289.


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Sofya Titarenko, Philip J. Withers, and Anatoly Yagola. An analytical formula for ring artefact suppression in x-ray tomography. Applied Mathematics Letters, 23(12):1489–1495, 2010. URL: https://www.sciencedirect.com/science/article/pii/S089396591000282X, doi:https://doi.org/10.1016/j.aml.2010.08.022.


Wim van Aarle, Willem Jan Palenstijn, Jeroen Cant, Eline Janssens, Folkert Bleichrodt, Andrei Dabravolski, Jan De Beenhouwer, K. Joost Batenburg, and Jan Sijbers. Fast and flexible x-ray tomography using the astra toolbox. Opt. Express, 24(22):25129–25147, 2016. doi:10.1364/OE.24.025129.


Nghia T. Vo, Robert C. Atwood, and Michael Drakopoulos. Radial lens distortion correction with sub-pixel accuracy for x-ray micro-tomography. Opt. Express, 23(25):32859–32868, Dec 2015. URL: http://www.opticsexpress.org/abstract.cfm?URI=oe-23-25-32859, doi:10.1364/OE.23.032859.


Nghia T. Vo, Robert C. Atwood, and Michael Drakopoulos. Superior techniques for eliminating ring artifacts in x-ray micro-tomography. Opt. Express, 26(22):28396–28412, Oct 2018. URL: http://www.opticsexpress.org/abstract.cfm?URI=oe-26-22-28396, doi:10.1364/OE.26.028396.


Nghia T. Vo, Robert C. Atwood, and Michael Drakopoulos. Preprocessing techniques for removing artifacts in synchrotron-based tomographic images. In Bert Müller and Ge Wang, editors, Developments in X-Ray Tomography XII, volume 11113, 309 – 328. International Society for Optics and Photonics, SPIE, 2019. doi:10.1117/12.2530324.


Nghia T. Vo, Michael Drakopoulos, Robert C. Atwood, and Christina Reinhard. Reliable method for calculating the center of rotation in parallel-beam tomography. Opt. Express, 22(16):19078–19086, Aug 2014. URL: http://www.opticsexpress.org/abstract.cfm?URI=oe-22-16-19078, doi:10.1364/OE.22.019078.


Nghia T. Vo, Hongchang Wang, Lingfei Hu, Tunhe Zhou, Marie-Christine Zdora, Hans Deyhle, Robert C. Atwood, and Michael Drakopoulos. Practical implementations of speckle-based phase-retrieval methods in python and gpu for tomography. In Developments in X-Ray Tomography XIV, volume 12242, 122420E. International Society for Optics and Photonics, SPIE, 2022. doi:10.1117/12.2636834.


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Hongchang Wang and Kawal Sawhney. Hard x-ray omnidirectional differential phase and dark-field imaging. Proceedings of the National Academy of Sciences, 2021. doi:10.1073/pnas.2022319118.


Marie-Christine Zdora, Pierre Thibault, Tunhe Zhou, Frieder J. Koch, Jenny Romell, Simone Sala, Arndt Last, Christoph Rau, and Irene Zanette. X-ray phase-contrast imaging and metrology through unified modulated pattern analysis. Phys. Rev. Lett., 118:203903, 2017. doi:10.1103/PhysRevLett.118.203903.